Anchorpoints

Gene id
CP00023G01080
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G13350NSP (nuclear shuttle protein)-interacting GTPase (NIG); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: nucleocytoplasmic transport, response to virus; LOCATED IN: cytosol, cytoplasm; EXPRESSED IN: flower, root, cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164); BEST Arabidopsis thaliana protein match is: ArfGap/RecO-like zinc finger domain-containing protein (TAIR:AT4G32630.1); Has 7463 Blast hits to 6530 proteins in 396 species: Archae - 2; Bacteria - 285; Metazoa - 3343; Fungi - 1586; Plants - 848; Viruses - 60; Other Eukaryotes - 1339 (source: NCBI BLink). NSP (nuclear shuttle protein)-interacting GTPase Encodes a GTPase that interacts with nuclear shuttle proteins (NSPs) from a number of different plant viruses. The gene is widely expressed and NIG transcript levels do not rise in response to viral infection. This cytoplasmic protein does not directly interact with a viral movement protein (MP), but, it does promote the movement of NSP from the nucleus to the cytoplasm. Overexpression of NIG in Arabidopsis plants renders them more sensitive to geminivirus infection.4-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G07910No description available.Bd3+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA07G09030CC_gene:AGD5,CC_gene:Agfg2,CC_gene:AGFG2,CC_gene:AGFG1,CC_gene:Agfg1,CC_gene:AGD14,CC_functional_completeness:complete,PRODUCT:GTPase-activating protein%2C putative%2C expressed,GO:0032312,GO:0008270,GO:0008060,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr7+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G11820GTPase-activating protein, putative, expressed2+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G10940No description available.Chr02+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT18G03500No description available.Chr18+View
PT18G07620No description available.Chr18-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G04200No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G067930Arf GTPase activating protein (AHRD V1 *--* D3B9L6_POLPA)%3B contains Interpro domain(s) IPR001164 Arf GTPase activating proteinch08+View
SL12G006990Arf GTPase activating protein (AHRD V1 *--* D3B391_POLPA)%3B contains Interpro domain(s) IPR001164 Arf GTPase activating proteinch12-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G05420name=GSVIVG01017129001;chr9-View
VV11G05470name=GSVIVG01015419001;chr11-View


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Description
Chromosome
Strand