Anchorpoints
- Gene id
- CP00018G00590
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G02150 | Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G02820.1); Has 10811 Blast hits to 5678 proteins in 200 species: Archae - 0; Bacteria - 11; Metazoa - 28; Fungi - 100; Plants - 10424; Viruses - 0; Other Eukaryotes - 248 (source: NCBI BLink). Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | + | View |
AT4G01990 | Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02370.1); Has 4131 Blast hits to 2907 proteins in 125 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 28; Plants - 4015; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). Tetratricopeptide repeat (TPR)-like superfamily protein | 4 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA11G05140 | CC_gene:At5g27460,CC_gene:At2g20710,CC_gene:At4g02820,CC_gene:At1g02150,CC_gene:At4g21705,CC_gene:At1g60770,CC_gene:At1g02370,CC_gene:At4g01990,CC_functional_completeness:complete,PRODUCT:Putative Pentatricopeptide repeat-containing protein At4g01990%2C mitochondrial,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr11 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_01G18720 | No description available. | Chr01 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT02G19440 | No description available. | Chr02 | - | View |
PT14G11900 | No description available. | Chr14 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G079320 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KB79_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | ch01 | - | View |
SL01G100580 | Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KB79_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeat | ch01 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV07G09410 | name=GSVIVG01028139001; | chr7 | + | View |
VV14G09640 | name=GSVIVG01031246001; | chr14 | - | View |