Anchorpoints

Gene id
CP00018G00520
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G02560nuclear encoded CLP protease 5 (CLPP5); FUNCTIONS IN: serine-type endopeptidase activity; INVOLVED IN: peptidyl-cysteine S-nitrosylation; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S14, ClpP, active site (InterPro:IPR018215), Peptidase S14, ClpP (InterPro:IPR001907); BEST Arabidopsis thaliana protein match is: CLP protease proteolytic subunit 3 (TAIR:AT1G66670.1); Has 13512 Blast hits to 13510 proteins in 3028 species: Archae - 2; Bacteria - 8525; Metazoa - 147; Fungi - 82; Plants - 1082; Viruses - 85; Other Eukaryotes - 3589 (source: NCBI BLink). nuclear encoded CLP protease 5 One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).1+View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G64430No description available.Bd1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G19510OsClp4 - Putative Clp protease homologue, expressed3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT14G11970No description available.Chr14+View
PT02G19520No description available.Chr02+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G037430No description available.chr_1+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G44190No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G100520ATP-dependent Clp protease proteolytic subunit (AHRD V1 ***- Q93YH0_SOLLC)%3B contains Interpro domain(s) IPR018215 Peptidase S14%2C ClpP%2C active sitech01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G09340name=GSVIVG01028130001;chr7-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G13410No description available.1-View


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Gene id
Species
Description
Chromosome
Strand