Anchorpoints

Gene id
CP00017G01100
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G18140Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4). SCP1-like small phosphatase 4b (SSP4b); CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: SCP1-like small phosphatase 4 (TAIR:AT5G46410.1); Has 2632 Blast hits to 2621 proteins in 242 species: Archae - 0; Bacteria - 12; Metazoa - 837; Fungi - 515; Plants - 509; Viruses - 1; Other Eukaryotes - 758 (source: NCBI BLink). SCP1-like small phosphatase 4b4-View
AT1G29770Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: phosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: pollen tube; CONTAINS InterPro DOMAIN/s: Dullard-like phosphatase domain (InterPro:IPR011948), NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT1G29780.1); Has 2585 Blast hits to 2574 proteins in 264 species: Archae - 0; Bacteria - 16; Metazoa - 830; Fungi - 532; Plants - 436; Viruses - 23; Other Eukaryotes - 748 (source: NCBI BLink).1+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT11G07830No description available.Chr11+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV10G03440name=GSVIVG01021382001;chr10+View


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Gene id
Species
Description
Chromosome
Strand