Anchorpoints

Gene id
CP00009G01100
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G16810pumilio 24 pumilio 24 (PUM24); FUNCTIONS IN: RNA binding, binding; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 5 (TAIR:AT3G20250.1); Has 2337 Blast hits to 1306 proteins in 237 species: Archae - 0; Bacteria - 1; Metazoa - 1209; Fungi - 478; Plants - 404; Viruses - 0; Other Eukaryotes - 245 (source: NCBI BLink). Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.3-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G00560No description available.Chr10+View
PT08G21140No description available.Chr08-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G065580Pumilio domain-containing protein KIAA0020 (AHRD V1 ***- B5X3V8_SALSA)%3B contains Interpro domain(s) IPR011989 Armadillo-like helicalch01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV05G12290name=GSVIVG01035090001;chr5+View


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Gene id
Species
Description
Chromosome
Strand