Anchorpoints

Gene id
CP00006G02700
Organism
Carica papaya

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CP00037G01460No description available.supercontig_37-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G51250Senescence/dehydration-associated protein-related Senescence/dehydration-associated protein-related; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT2G17840.1); Has 288 Blast hits to 288 proteins in 88 species: Archae - 0; Bacteria - 8; Metazoa - 87; Fungi - 46; Plants - 136; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).3+View
AT4G35985Senescence/dehydration-associated protein-related Senescence/dehydration-associated protein-related; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT2G17840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).4-View
AT2G17840Senescence/dehydration-associated protein-related EARLY-RESPONSIVE TO DEHYDRATION 7 (ERD7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water deprivation, response to high light intensity, response to salt stress, response to cold; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Senescence/spartin-associated (InterPro:IPR009686); BEST Arabidopsis thaliana protein match is: Senescence/dehydration-associated protein-related (TAIR:AT4G35985.1); Has 250 Blast hits to 250 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 39; Plants - 134; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.2-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G07860CC_gene:Spg20,CC_gene:SPG20,CC_functional_completeness:complete,PRODUCT:senescence-associated protein%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr1-View
MA01G02470CC_gene:CG12001,CC_gene:hemL,CC_gene:rafD,CC_gene:NUDT23,CC_gene:feuB,CC_gene:Spg20,CC_gene:SPG20,CC_functional_completeness:complete,PRODUCT:senescence-associated protein%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr1-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS03G13840senescence-associated protein, putative, expressed3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G12260No description available.Chr03-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G17410No description available.Chr04+View
PT05G11160No description available.Chr05+View
PT09G13350No description available.Chr09+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI004G29080No description available.scaffold_4-View
SI009G48810No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G062050ERD7 protein (Fragment) (AHRD V1 *-*- Q94II1_ARATH)%3B contains Interpro domain(s) IPR009686 Senescence-associatedch02-View
SL01G111440Senescence-associated protein 12 (AHRD V1 *-*- O81657_HEMSP)%3B contains Interpro domain(s) IPR009686 Senescence-associatedch01+View
SL02G083690Senescence-associated protein 12 (AHRD V1 *-*- O81657_HEMSP)%3B contains Interpro domain(s) IPR009686 Senescence-associatedch02-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G04860name=GSVIVG01024039001;chr3+View
VV04G00510name=GSVIVG01018750001;chr4+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G24940No description available.9+View


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Gene id
Species
Description
Chromosome
Strand