Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- CP00006G01290
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G18280 | Member of TLP family tubby like protein 2 (TLP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Tubby, C-terminal, conserved site (InterPro:IPR018066), Tubby, C-terminal (InterPro:IPR000007); BEST Arabidopsis thaliana protein match is: tubby like protein 3 (TAIR:AT2G47900.3); Has 957 Blast hits to 948 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 352; Fungi - 19; Plants - 471; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). tubby like protein 2 | 2 | + | View |
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD3G52767 | No description available. | Bd3 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA10G20970 | CC_gene:TULP7,CC_gene:TULP11,CC_gene:TULP9,CC_gene:TULP3,CC_gene:TULP2,CC_gene:TULP6,CC_gene:TULP5,CC_functional_completeness:fragment,PRODUCT:Tubby-like F-box protein 5,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr10 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS02G47640 | OsFBT4 - F-box and tubby domain containing protein, expressed Tubby-like F-box protein 5 | 2 | + | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_02G45920 | No description available. | Chr02 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT02G03460 | No description available. | Chr02 | + | View |
| PT05G12160 | No description available. | Chr05 | + | View |
| PT07G02340 | No description available. | Chr07 | + | View |
| PT05G22850 | No description available. | Chr05 | - | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB04G030550 | No description available. | chr_4 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI001G30070 | No description available. | scaffold_1 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL02G062670 | Tubby-like F-box protein 5 (AHRD V1 ***- TLP5_ORYSJ)%3B contains Interpro domain(s) IPR000007 Tubby%2C C-terminal | ch02 | + | View |
| SL02G085130 | Tubby-like F-box protein 5 (AHRD V1 ***- TLP5_ORYSJ)%3B contains Interpro domain(s) IPR000007 Tubby%2C C-terminal | ch02 | + | View |
| SL03G033980 | Tubby-like F-box protein 5 (AHRD V1 ***- TLP5_ORYSJ)%3B contains Interpro domain(s) IPR000007 Tubby%2C C-terminal | ch03 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV18G09070 | name=GSVIVG01009728001; | chr18 | - | View |
| VV04G02010 | name=GSVIVG01018940001; | chr4 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM05G37920 | No description available. | 5 | + | View |
| ZM04G22190 | No description available. | 4 | + | View |