Anchorpoints

Gene id
CP00006G00170
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G37650Involved in radial organization of the root and shoot axial organs. Essential for normal shoot gravitropism. The protein moves in a highly specific manner from the cells of the stele in which it is synthesized outward. Movement requires sequences within the GRAS and VHIID domains. SHORT ROOT (SHR); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G49950.1); Has 2470 Blast hits to 2429 proteins in 304 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 15; Plants - 2427; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). GRAS family transcription factor4+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G23330CC_gene:SCL5,CC_gene:CIGR2,CC_gene:SCL21,CC_gene:SHR,CC_gene:SHR2,CC_gene:SHR1,CC_functional_completeness:complete,PRODUCT:Protein SHORT-ROOT 1,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr1+View
MA08G31710CC_gene:SCL5,CC_gene:CIGR2,CC_gene:SCL21,CC_gene:SHR,CC_gene:SHR2,CC_gene:SHR1,CC_functional_completeness:complete,PRODUCT:Protein SHORT-ROOT 1,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G39820Protein SHORT-ROOT 1 SHR, putative, expressed7+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G36690No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G092370GRAS family transcription factor (AHRD V1 **-- B9NAS9_POPTR)%3B contains Interpro domain(s) IPR005202 GRAS transcription factorch02-View


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Gene id
Species
Description
Chromosome
Strand