Anchorpoints
- Gene id
- CP00006G00170
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G37650 | Involved in radial organization of the root and shoot axial organs. Essential for normal shoot gravitropism. The protein moves in a highly specific manner from the cells of the stele in which it is synthesized outward. Movement requires sequences within the GRAS and VHIID domains. SHORT ROOT (SHR); CONTAINS InterPro DOMAIN/s: Transcription factor GRAS (InterPro:IPR005202); BEST Arabidopsis thaliana protein match is: GRAS family transcription factor (TAIR:AT3G49950.1); Has 2470 Blast hits to 2429 proteins in 304 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 15; Plants - 2427; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). GRAS family transcription factor | 4 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA01G23330 | CC_gene:SCL5,CC_gene:CIGR2,CC_gene:SCL21,CC_gene:SHR,CC_gene:SHR2,CC_gene:SHR1,CC_functional_completeness:complete,PRODUCT:Protein SHORT-ROOT 1,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr1 | + | View |
MA08G31710 | CC_gene:SCL5,CC_gene:CIGR2,CC_gene:SCL21,CC_gene:SHR,CC_gene:SHR2,CC_gene:SHR1,CC_functional_completeness:complete,PRODUCT:Protein SHORT-ROOT 1,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr8 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS07G39820 | Protein SHORT-ROOT 1 SHR, putative, expressed | 7 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI009G36690 | No description available. | scaffold_9 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL02G092370 | GRAS family transcription factor (AHRD V1 **-- B9NAS9_POPTR)%3B contains Interpro domain(s) IPR005202 GRAS transcription factor | ch02 | - | View |