Anchorpoints
- Gene id
- CP00003G01350
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G53570 | Ypt/Rab-GAP domain of gyp1p superfamily protein Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G49350.1); Has 4559 Blast hits to 4121 proteins in 234 species: Archae - 0; Bacteria - 21; Metazoa - 2510; Fungi - 811; Plants - 657; Viruses - 1; Other Eukaryotes - 559 (source: NCBI BLink). | 5 | - | View |
AT5G24390 | Ypt/Rab-GAP domain of gyp1p superfamily protein Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G49350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | 5 | - | View |
AT3G49350 | Ypt/Rab-GAP domain of gyp1p superfamily protein Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT5G24390.1); Has 4289 Blast hits to 3657 proteins in 225 species: Archae - 0; Bacteria - 0; Metazoa - 2316; Fungi - 775; Plants - 693; Viruses - 0; Other Eukaryotes - 505 (source: NCBI BLink). | 3 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA01G04210 | CC_gene:Tbc1d25,CC_gene:Tbc1d17,CC_gene:TBC1D15,CC_gene:GYP7,CC_gene:gyp7,CC_functional_completeness:fragment,PRODUCT:Putative GTPase-activating protein gyp7,GO:0032313,GO:0005622,GO:0005097,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr1 | - | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS10G37410 | TBC domain containing protein, expressed | 10 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G14630 | No description available. | Chr03 | - | View |
PT12G02450 | No description available. | Chr12 | + | View |
PT15G00740 | No description available. | Chr15 | + | View |
PT01G08430 | No description available. | Chr01 | + | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB02G030630 | No description available. | chr_2 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G082590 | TBC1 domain family member 15 (AHRD V1 *--- Q6P4X9_XENTR)%3B contains Interpro domain(s) IPR000195 RabGAP/TBC | ch03 | + | View |
SL06G053190 | GTPase activating-like protein (AHRD V1 **-- Q9SG14_ARATH)%3B contains Interpro domain(s) IPR000195 RabGAP/TBC | ch06 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV16G09540 | name=GSVIVG01038614001; | chr16 | + | View |
VV02G05590 | name=GSVIVG01019648001; | chr2 | - | View |