Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- CP00003G01180
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00096G00570 | No description available. | supercontig_96 | + | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G46590 | DOF AFFECTING GERMINATION 2 (DAG2); CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: Dof-type zinc finger DNA-binding family protein (TAIR:AT3G61850.4); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). Dof-type zinc finger DNA-binding family protein encodes a protein containing Dof zinc finger motifs. expression is limited to vascular system of the mother plant. recessive mutation is inherited as maternal-effect and expression is not detected in the embryo. mutants are defective in seed germination. mutants are more dependent on light and cold treatment and less sensitive to gibberellin during seed germination. | 2 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA01G04060 | CC_gene:DOF2.4,CC_gene:DOF5.3,CC_gene:DOF3.6,CC_gene:DOF2.5,CC_gene:DOF3.7,CC_gene:PBF,CC_gene:DOF1.8,CC_gene:DOF4.6,CC_functional_completeness:fragment,PRODUCT:dof zinc finger domain containing protein%2C putative%2C expressed,GO:0008270,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr1 | + | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS01G55340 | dof zinc finger domain containing protein, putative, expressed | 1 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT02G17430 | No description available. | Chr02 | + | View |
| PT15G00930 | No description available. | Chr15 | - | View |
| PT03G14450 | No description available. | Chr03 | + | View |
| PT14G10090 | No description available. | Chr14 | + | View |
| PT01G08640 | No description available. | Chr01 | - | View |
| PT12G01870 | No description available. | Chr12 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL08G082910 | Dof zinc finger protein 2 (AHRD V1 ***- A5HWF1_HORVD)%3B contains Interpro domain(s) IPR003851 Zinc finger%2C Dof-type | ch08 | + | View |
| SL01G096120 | Dof zinc finger protein 2 (AHRD V1 *-*- A5HWF1_HORVD)%3B contains Interpro domain(s) IPR003851 Zinc finger%2C Dof-type | ch01 | + | View |
| SL03G082840 | Dof zinc finger protein 2 (AHRD V1 *-*- A5HWF1_HORVD)%3B contains Interpro domain(s) IPR003851 Zinc finger%2C Dof-type | ch03 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV15G06990 | name=GSVIVG01027184001; | chr15 | - | View |
| VV16G09350 | name=GSVIVG01038591001; | chr16 | - | View |