Anchorpoints

Gene id
CP00001G03120
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G55200Encodes a spliceosomal protein that is required for proper reproduction. RNAi lines display low pollen viability,caused by a defect in the transition from microspore to bicellular stage during pollen development. Cleavage and polyadenylation specificity factor (CPSF) A subunit protein Cleavage and polyadenylation specificity factor (CPSF) A subunit protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus, chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: WD40 repeat (InterPro:IPR001680), Cleavage/polyadenylation specificity factor, A subunit, C-terminal (InterPro:IPR004871); BEST Arabidopsis thaliana protein match is: Cleavage and polyadenylation specificity factor (CPSF) A subunit protein (TAIR:AT3G55220.1); Has 1074 Blast hits to 953 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 406; Fungi - 248; Plants - 228; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink).3+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G21210No description available.Chr10+View
PT08G04890No description available.Chr08-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G010260Pre-mRNA-splicing factor RSE1 (AHRD V1 ***- A8N7S1_COPC7)%3B contains Interpro domain(s) IPR004871 Cleavage and polyadenylation specificity factor%2C A subunit%2C C-terminalch04-View


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Gene id
Species
Description
Chromosome
Strand