Anchorpoints

Gene id
CP00001G02810
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT3G55020Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G39280.1); Has 8291 Blast hits to 7654 proteins in 526 species: Archae - 15; Bacteria - 632; Metazoa - 4273; Fungi - 1225; Plants - 609; Viruses - 33; Other Eukaryotes - 1504 (source: NCBI BLink). Ypt/Rab-GAP domain of gyp1p superfamily protein3-View
AT2G39280Ypt/Rab-GAP domain of gyp1p superfamily protein; FUNCTIONS IN: RAB GTPase activator activity; INVOLVED IN: regulation of Rab GTPase activity; LOCATED IN: intracellular; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195); BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT3G55020.1). Ypt/Rab-GAP domain of gyp1p superfamily protein2-View

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD1G65940No description available.Bd1-View
BD2G22850No description available.Bd2+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G38950TBC domain containing protein, expressed5-View
OS03G17540TBC domain containing protein, expressed3+View
OS01G61860TBC domain containing protein, expressed1-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G16130No description available.Chr03+View
OSINDICA_01G58550No description available.Chr01-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G21500No description available.Chr10+View
PT08G04660No description available.Chr08-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G038840No description available.chr_1-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G45910No description available.scaffold_9-View
SI005G38030No description available.scaffold_5-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G007160TBC1 domain family member 9B (AHRD V1 *--- B9A6K8_HUMAN)%3B contains Interpro domain(s) IPR000195 RabGAP/TBCch09+View
SL04G009560TBC1 domain family member 8B (AHRD V1 *--- B9A6K5_HUMAN)%3B contains Interpro domain(s) IPR000195 RabGAP/TBCch04-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G01890name=GSVIVG01025565001;chr8+View
VV13G08930name=GSVIVG01032641001;chr13-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G23420No description available.9-View
ZM01G11920No description available.1+View


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Gene id
Species
Description
Chromosome
Strand