Anchorpoints

Gene id
CP00001G00670
Organism
Carica papaya

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G69440ARGONAUTE7 (AGO7); FUNCTIONS IN: nucleic acid binding; INVOLVED IN: production of ta-siRNAs involved in RNA interference, vegetative phase change, production of lsiRNA involved in RNA interference, regulation of development, heterochronic, gene silencing by miRNA; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1785 (InterPro:IPR014811), Stem cell self-renewal protein Piwi (InterPro:IPR003165), Argonaute/Dicer protein, PAZ (InterPro:IPR003100), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337); BEST Arabidopsis thaliana protein match is: Stabilizer of iron transporter SufD / Polynucleotidyl transferase (TAIR:AT1G48410.1); Has 2067 Blast hits to 2008 proteins in 214 species: Archae - 0; Bacteria - 0; Metazoa - 1082; Fungi - 299; Plants - 502; Viruses - 5; Other Eukaryotes - 179 (source: NCBI BLink). Argonaute family protein Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds.1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT10G16380No description available.Chr10-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G032060No description available.chr_1+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G010970ARGONAUTE 1 (AHRD V1 ***- D6RUV9_TOBAC)%3B contains Interpro domain(s) IPR003165 Stem cell self-renewal protein Piwich01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV01G10940name=GSVIVG01012490001;chr1+View


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Gene id
Species
Description
Chromosome
Strand