Anchorpoints
- Gene id
- CP00001G00630
- Organism
- Carica papaya
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00014G01160 | No description available. | supercontig_14 | - | View |
Orthologs (inter-species colinear regions)
Arabidopsis thaliana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT1G26670 | member of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles. VTI1B; CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal (InterPro:IPR007705); BEST Arabidopsis thaliana protein match is: Vesicle transport v-SNARE family protein (TAIR:AT5G39510.1); Has 841 Blast hits to 839 proteins in 213 species: Archae - 2; Bacteria - 11; Metazoa - 288; Fungi - 144; Plants - 215; Viruses - 0; Other Eukaryotes - 181 (source: NCBI BLink). Vesicle transport v-SNARE family protein | 1 | + | View |
AT3G29100 | vesicle transport V-snare 13 (VTI13); FUNCTIONS IN: SNARE binding, receptor activity; INVOLVED IN: cellular membrane fusion, intra-Golgi vesicle-mediated transport; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Vesicle transport v-SNARE, N-terminal (InterPro:IPR007705); BEST Arabidopsis thaliana protein match is: Vesicle transport v-SNARE family protein (TAIR:AT5G39510.1); Has 695 Blast hits to 693 proteins in 200 species: Archae - 2; Bacteria - 0; Metazoa - 259; Fungi - 142; Plants - 163; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink). vesicle transport V-snare 13 Encodes a member of the Arabidopsis v-SNARE (vesicle soluble NSF attachment protein receptor) family that has 3 members: VTI11, VTI12, and VTI13. This gene is not expressed at levels detectable by RT-PCR. However, one EST corresponding to this gene has been isolated. | 3 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT08G09100 | No description available. | Chr08 | - | View |
PT17G08770 | No description available. | Chr17 | - | View |
PT10G16430 | No description available. | Chr10 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL03G115760 | Vesicle transport v-SNARE 11-like (AHRD V1 ***- Q307Y3_SOLTU)%3B contains Interpro domain(s) IPR007705 Vesicle transport v-SNARE | ch03 | + | View |
SL05G013050 | Vesicle transport v-SNARE 11-like (AHRD V1 ***- Q307Y3_SOLTU)%3B contains Interpro domain(s) IPR007705 Vesicle transport v-SNARE | ch05 | + | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV17G03340 | name=GSVIVG01007964001; | chr17 | - | View |
VV01G10970 | name=GSVIVG01012494001; | chr1 | + | View |