Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G32340NDR1/HIN1-like 8 Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not detected under normal conditions and in response to cucumber mosaic virus or spermine. NDR1/HIN1-like 8 (NHL8); FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), RWD (InterPro:IPR006575); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G14250.1); Has 3653 Blast hits to 3199 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 1736; Fungi - 604; Plants - 670; Viruses - 7; Other Eukaryotes - 636 (source: NCBI BLink).1-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA05G14430CC_gene:ARI9,CC_gene:rnf144a,CC_gene:rnf144ab,CC_gene:Rnf144a,CC_gene:ITT1,CC_gene:itt1,CC_gene:Rnf14,CC_gene:RNF14,CC_functional_completeness:complete,PRODUCT:Putative E3 ubiquitin-protein ligase RNF14,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr5+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G46720ara54-like RING finger protein, putative, expressed2+View
OS04G50720ara54-like RING finger protein, putative, expressed4+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_04G42490No description available.Chr04+View
OSINDICA_02G45070No description available.Chr02+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G13940No description available.Chr01-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB06G027130No description available.chr_6+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G29250No description available.scaffold_1+View
SI007G22620No description available.scaffold_7+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G005150Ubiquitin ligase (AHRD V1 **-* B3G3Y7_ADIVA)%3B contains Interpro domain(s) IPR006575 RWDch08+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV02G01990name=GSVIVG01013115001;chr2+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G37260No description available.5+View
ZM02G05800No description available.2-View


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Gene id
Species
Description
Chromosome
Strand