Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BD3G46610No description available.Bd3-View
BD1G71830No description available.Bd1+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G39910ubiquitin-specific protease 3 (UBP3); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Encodes a nuclear ubiquitin-specific protease. ubiquitin-specific protease 34-View
AT2G22310ubiquitin-specific protease 4 Encodes a ubiquitin-specific protease. ubiquitin-specific protease 4 (UBP4); CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394); BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 3 (TAIR:AT4G39910.1).2-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G37950ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed4-View
OS03G09080ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed3-View
OS02G36400ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed2-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G07980No description available.Chr03-View
OSINDICA_04G29580No description available.Chr04-View
OSINDICA_02G35210No description available.Chr02-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G09360No description available.Chr07-View
PT05G07490No description available.Chr05+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G023700No description available.chr_4-View
SB06G018520No description available.chr_6-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI007G12470No description available.scaffold_7-View
SI009G52650No description available.scaffold_9+View
SI001G21510No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G105240Ubiquitin carboxyl-terminal hydrolase (AHRD V1 **** B9SZ50_RICCO)%3B contains Interpro domain(s) IPR001394 Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2ch01-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM05G31580No description available.5-View
ZM10G17860No description available.10-View
ZM02G13610No description available.2+View


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Gene id
Species
Description
Chromosome
Strand