Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BD2G53800No description available.Bd2+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G40370laccase 5 laccase 5 (LAC5); FUNCTIONS IN: laccase activity; INVOLVED IN: response to copper ion; LOCATED IN: endomembrane system, apoplast; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Multicopper oxidase, type 3 (InterPro:IPR011707), Laccase (InterPro:IPR017761), Multicopper oxidase, type 2 (InterPro:IPR011706), Cupredoxin (InterPro:IPR008972), Multicopper oxidase, copper-binding site (InterPro:IPR002355), Multicopper oxidase, type 1 (InterPro:IPR001117); BEST Arabidopsis thaliana protein match is: laccase 12 (TAIR:AT5G05390.1); Has 10120 Blast hits to 8186 proteins in 1337 species: Archae - 37; Bacteria - 4008; Metazoa - 431; Fungi - 3685; Plants - 1575; Viruses - 0; Other Eukaryotes - 384 (source: NCBI BLink). putative laccase, a member of laccase family of genes (17 members in Arabidopsis).2-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00002G03320No description available.supercontig_2+View
CP00019G01210No description available.supercontig_19+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS11G01730laccase-23 precursor, putative, expressed Putative laccase-1711+View
OS12G01730laccase-23 precursor, putative, expressed Laccase-2312+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_12G00860No description available.Chr12+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT13G15270No description available.Chr13-View
PT10G18350No description available.Chr10+View
PT08G07370No description available.Chr08-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G038550No description available.chr_3+View
SB05G000680No description available.chr_5+View
SB08G000720No description available.chr_8+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI005G37400No description available.scaffold_5+View
SI008G01760No description available.scaffold_8-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G050530Laccase (AHRD V1 ***- Q9ZP47_POPTR)%3B contains Interpro domain(s) IPR017761 Laccasech06-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV13G09850name=GSVIVG01032744001;chr13-View
VV06G00980name=GSVIVG01024634001;chr6-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM08G32650No description available.8-View
ZM04G28290No description available.4+View
ZM01G12650No description available.1+View


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Gene id
Species
Description
Chromosome
Strand