Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT5G51860K-box region and MADS-box transcription factor family protein ; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: embryo; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 71 (TAIR:AT5G51870.1); Has 6804 Blast hits to 6802 proteins in 884 species: Archae - 0; Bacteria - 0; Metazoa - 630; Fungi - 309; Plants - 5790; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). Encodes a MADS-box transcription factor involved in floral transition. K-box region and MADS-box transcription factor family protein5-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G03760CC_gene:MADS1,CC_gene:AGL14,CC_gene:AGL19,CC_gene:MADS56,CC_gene:SOC1,CC_gene:MADS50,CC_functional_completeness:complete,PRODUCT:MADS-box transcription factor 50,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr1-View
MA08G12700CC_gene:MADS58,CC_gene:MADS6,CC_gene:AGL14,CC_gene:AGL19,CC_gene:MADS56,CC_gene:SOC1,CC_gene:MADS50,CC_functional_completeness:complete,PRODUCT:MADS-box transcription factor 50,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View
MA11G22070CC_gene:AG1,CC_gene:AGL11,CC_gene:AGL14,CC_gene:MADS56,CC_gene:AGL19,CC_gene:SOC1,CC_gene:MADS50,CC_functional_completeness:fragment,PRODUCT:MADS-box transcription factor 50,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr11-View
MA11G02820CC_gene:MADS18,CC_gene:AGL14,CC_gene:SOC1,CC_gene:AGL19,CC_gene:MADS56,CC_gene:MADS50,CC_functional_completeness:fragment,PRODUCT:Putative MADS-box transcription factor 50,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr11-View
MA05G10470CC_gene:AG2,CC_gene:AGL5,CC_gene:AGL14,CC_gene:AGL19,CC_gene:MADS56,CC_gene:SOC1,CC_gene:MADS50,CC_functional_completeness:complete,PRODUCT:MADS-box transcription factor 50,GO:0043565,GO:0005634,GO:0003700,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr5-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G49150MADS-box transcription factor 17 OsMADS17 - MADS-box family gene with MIKCc type-box, expressed4+View
OS02G45770OsMADS6 - MADS-box family gene with MIKCc type-box, expressed MADS-box transcription factor 62+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_10G29380No description available.Chr10+View
OSINDICA_02G44110No description available.Chr02+View
OSINDICA_04G41210No description available.Chr04+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G031750No description available.chr_4-View
SB06G026300No description available.chr_6+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI007G21570No description available.scaffold_7+View
SI009G35320No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G092950MADS-box transcription factor 2 (AHRD V1 **** D1MFS7_HEVBR)%3B contains Interpro domain(s) IPR002487 Transcription factor%2C K-boxch01+View
SL08G080100MADS box transcription factor (AHRD V1 **** C3PTE7_POPTO)%3B contains Interpro domain(s) IPR002100 Transcription factor%2C MADS-boxch08-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G21210MADS box protein4+View
ZM05G36660MADS box protein5+View


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Gene id
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Description
Chromosome
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