Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G34580Encodes COW1 (can of worms1), a phosphatidylinositol transfer protein essential for root hair tip growth. The N-terminus of the COW1 protein is 32% identical to an essential phosphatidylinositol transfer protein (PITP), the yeast Sec14 protein (sec14p) while the C-terminus is 34.5% identical to a late nodulin of Lotus japonicus, Nlj16. Expression of COW1 complements the growth defect associated with Sec14p dysfunction in yeast. GFP fused to the COW1 protein specifically accumulates at the site of root hair outgrowth. Sec14p-like phosphatidylinositol transfer family protein CAN OF WORMS1 (COW1); FUNCTIONS IN: transporter activity, phosphatidylinositol transporter activity; INVOLVED IN: root epidermal cell differentiation, transport, root hair cell tip growth, cell tip growth; LOCATED IN: intracellular; EXPRESSED IN: 9 plant structures; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT2G16380.1); Has 3006 Blast hits to 2988 proteins in 244 species: Archae - 0; Bacteria - 0; Metazoa - 982; Fungi - 671; Plants - 907; Viruses - 0; Other Eukaryotes - 446 (source: NCBI BLink).4+View
AT1G75370Sec14p-like phosphatidylinositol transfer family protein Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G19650.1); Has 2578 Blast hits to 2567 proteins in 225 species: Archae - 0; Bacteria - 2; Metazoa - 778; Fungi - 522; Plants - 891; Viruses - 0; Other Eukaryotes - 385 (source: NCBI BLink).1-View
AT2G18180Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14-like 12 (TAIR:AT4G36490.1); Has 2664 Blast hits to 2639 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 594; Plants - 895; Viruses - 1; Other Eukaryotes - 413 (source: NCBI BLink). Sec14p-like phosphatidylinositol transfer family protein2-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA10G21140CC_gene:YKL091C,CC_gene:SEC14,CC_gene:sec14,CC_functional_completeness:modules,PRODUCT:Putative Sec14 cytosolic factor,GO:0006810,GO:0005622,GO:0005215,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10-View
MA01G12490CC_gene:YKL091C,CC_gene:SEC14,CC_gene:sec14,CC_functional_completeness:modules,PRODUCT:Putative Sec14 cytosolic factor,GO:0006810,GO:0005622,GO:0005215,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS02G04020No description available.2+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_02G03360No description available.Chr02+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT09G11940No description available.Chr09+View
PT02G03260No description available.Chr02+View
PT04G15760No description available.Chr04+View
PT05G23050No description available.Chr05-View
PT05G11970No description available.Chr05-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB04G002750No description available.chr_4+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI001G10010No description available.scaffold_1+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G053900SEC14-like protein (AHRD V1 **-- Q9T027_ARATH)%3B contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function%2C C-terminalch10-View
SL04G080690SEC14-like protein (AHRD V1 **-- Q9T027_ARATH)%3B contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function%2C C-terminalch04-View
SL01G109860Phosphatidylinositol/phosphatidylcholine transfer protein-like (AHRD V1 **-* Q9LRX7_ARATH)%3B contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function%2C C-terminalch01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G09350name=GSVIVG01009759001;chr18-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM04G41010No description available.4+View
ZM05G18830No description available.5+View


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