Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT4G01990Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Tetratricopeptide-like helical (InterPro:IPR011990); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G02370.1); Has 4131 Blast hits to 2907 proteins in 125 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 28; Plants - 4015; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). Tetratricopeptide repeat (TPR)-like superfamily protein4-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA11G05140CC_gene:At5g27460,CC_gene:At2g20710,CC_gene:At4g02820,CC_gene:At1g02150,CC_gene:At4g21705,CC_gene:At1g60770,CC_gene:At1g02370,CC_gene:At4g01990,CC_functional_completeness:complete,PRODUCT:Putative Pentatricopeptide repeat-containing protein At4g01990%2C mitochondrial,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr11-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G19490pentatricopeptide, putative, expressed1-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G18720No description available.Chr01-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB03G012450No description available.chr_3-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI005G03960No description available.scaffold_5-View
SI005G02830No description available.scaffold_5+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G100580Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7KB79_ARALY)%3B contains Interpro domain(s) IPR002885 Pentatricopeptide repeatch01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G09410name=GSVIVG01028139001;chr7+View
VV14G09640name=GSVIVG01031246001;chr14-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM08G07400No description available.8-View


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Gene id
Species
Description
Chromosome
Strand