Anchorpoints

Paralogs (intra-species colinear regions)

No paralogous anchorpoints available


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G80360Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Encodes a methionine-specific aminotransferase that uses the ethylene biosynthetic intermediate methionine as an amino donor and the auxin biosynthetic intermediate indole-3-pyruvic acid as an amino acceptor to produce L-tryptophan and 2-oxo-4-methylthiobutyric acid. These actions allow VAS1 to coordinate both auxin and ethylene biosynthesis. It functions downstream of TAA1/SAV3 but upstream of YUCs to negatively modulate IAA biosynthesis directly by altering the 3-IPA pool. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase (TAIR:AT2G22250.1); Has 39039 Blast hits to 39038 proteins in 3030 species: Archae - 1022; Bacteria - 27880; Metazoa - 604; Fungi - 771; Plants - 1310; Viruses - 0; Other Eukaryotes - 7452 (source: NCBI BLink).1-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G08270aminotransferase, classes I and II, domain containing protein, expressed1-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_01G07670No description available.Chr01-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT01G17700No description available.Chr01-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI005G12610No description available.scaffold_5-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV09G05700name=GSVIVG01017171001;chr9+View
VV04G11000name=GSVIVG01035717001;chr4-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM08G04430transaminase/ transferase, transferring nitrogenous groups8-View
ZM03G03260No description available.3+View


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Gene id
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Description
Chromosome
Strand