Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BD4G03130No description available.Bd4-View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT2G22950Encodes a putative auto-regulated Ca2+-ATPase located in the plasma membrane involved in transporting Ca2+ outside developing pollen grains. This activity is important to support normal pollen development, particularly the progression to uninucleated microspores to bicellular pollen grains. Cation transporter/ E1-E2 ATPase family protein; FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: calcium ion transport, cation transport, metabolic process, ATP biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 47259 Blast hits to 34730 proteins in 3216 species: Archae - 909; Bacteria - 32565; Metazoa - 4081; Fungi - 2861; Plants - 2101; Viruses - 3; Other Eukaryotes - 4739 (source: NCBI BLink). Cation transporter/ E1-E2 ATPase family protein2+View
AT4G37640Encodes a calmodulin-regulated Ca(2+)-pump located in the endoplasmic reticulum. Belongs to plant 2B ATPase's with an N-terminal autoinhibitor. calcium ATPase 2 (ACA2); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding, calcium ion transmembrane transporter activity; INVOLVED IN: transport; LOCATED IN: endoplasmic reticulum, plasma membrane, endoplasmic reticulum membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: Cation transporter/ E1-E2 ATPase family protein (TAIR:AT2G22950.1); Has 47430 Blast hits to 34684 proteins in 3201 species: Archae - 904; Bacteria - 32793; Metazoa - 4036; Fungi - 2849; Plants - 2078; Viruses - 3; Other Eukaryotes - 4767 (source: NCBI BLink). calcium ATPase 24-View
AT1G27770autoinhibited Ca2+-ATPase 1 (ACA1); FUNCTIONS IN: calcium channel activity, calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: cation transport, calcium ion transport, metabolic process, ATP biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, chloroplast inner membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: calcium ATPase 2 (TAIR:AT4G37640.1); Has 48177 Blast hits to 34612 proteins in 3273 species: Archae - 915; Bacteria - 33514; Metazoa - 4128; Fungi - 2798; Plants - 2164; Viruses - 3; Other Eukaryotes - 4655 (source: NCBI BLink). Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor. autoinhibited Ca2+-ATPase 11-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G00240No description available.supercontig_6+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA06G07910CC_gene:Os12g0586600,CC_gene:Os12g0136900,CC_gene:ACA7,CC_gene:Os05g0495600,CC_gene:Os01g0939100,CC_gene:Os11g0140400,CC_gene:ACA2,CC_gene:ACA1,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0016020,GO:0006754,GO:0005524,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:3.6.3.8chr6+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS12G39660Calcium-transporting ATPase 1, plasma membrane-type calcium-transporting ATPase, plasma membrane-type, putative, expressed12+View
OS03G10640calcium-transporting ATPase, plasma membrane-type, putative, expressed3+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_12G27630No description available.Chr12+View
OSINDICA_03G09110No description available.Chr03+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G14700No description available.Chr05+View
PT07G05550No description available.Chr07-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G043620No description available.chr_1-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G51550No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G092450Calcium-transporting ATPase 1 (AHRD V1 ***- Q7XBH9_CERRI)%3B contains Interpro domain(s) IPR006408 ATPase%2C P-type%2C calcium-transporting%2C PMCA-typech02+View
SL04G077870Calcium-transporting ATPase 1 (AHRD V1 **** Q7XBH9_CERRI)%3B contains Interpro domain(s) IPR006408 ATPase%2C P-type%2C calcium-transporting%2C PMCA-typech04+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM01G07010No description available.1-View


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