Anchorpoints

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
BD1G22180No description available.Bd1+View


Orthologs (inter-species colinear regions)

Arabidopsis thaliana

Gene id Description Chromosome Strand Multiplicon
AT1G13740ABI five binding protein 2 (AFP2); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: ABI five binding protein (TAIR:AT1G69260.1); Has 207 Blast hits to 201 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 6; Plants - 185; Viruses - 3; Other Eukaryotes - 8 (source: NCBI BLink). ABI five binding protein 2 Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent.1+View
AT3G29575ABI five binding protein 3 (AFP3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1675 (InterPro:IPR012463); BEST Arabidopsis thaliana protein match is: ABI five binding protein (TAIR:AT1G69260.1); Has 196 Blast hits to 190 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 4; Plants - 184; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ABI five binding protein 33-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00014G01830No description available.supercontig_14-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA07G27280CC_gene:AFP1,CC_gene:Os07g0602900,CC_gene:Os03g0214200,CC_functional_completeness:complete,PRODUCT:Putative Ninja-family protein 5,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr7-View
MA09G07230CC_gene:Os07g0602900,CC_gene:AFP-D1,CC_gene:AFP-B1,CC_gene:AFP-A1,CC_gene:AFP3,CC_gene:Os03g0419100,CC_gene:Os03g0214200,CC_functional_completeness:complete,PRODUCT:Putative Ninja-family protein Os03g0214200,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr9+View
MA04G14840CC_gene:Os03g0214200,CC_gene:AFP1,CC_gene:AFP2,CC_gene:AFP-B1,CC_gene:AFP-D1,CC_functional_completeness:complete,PRODUCT:Putative Ninja-family protein 3,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr4-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS07G41160Ninja-family protein Os07g0602900 protein of unknown function DUF1675 domain containing protein, expressed7-View
OS03G11550Ninja-family protein Os03g0214200 protein of unknown function DUF1675 domain containing protein, expressed3-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G10080No description available.Chr03-View
OSINDICA_07G33480No description available.Chr07-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G12060No description available.Chr04-View
PT10G15790No description available.Chr10+View
PT08G09650No description available.Chr08-View
PT17G09450No description available.Chr17-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB01G032370No description available.chr_1-View
SB01G042880No description available.chr_1+View
SB02G038620No description available.chr_2-View
SB10G008970No description available.chr_10-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G37520No description available.scaffold_9+View
SI002G39020No description available.scaffold_2-View
SI009G50690No description available.scaffold_9+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G005380Ninja-family protein Os03g0214200 (AHRD V1 ***- NNJA1_ORYSJ)%3B contains Interpro domain(s) IPR012463 Protein of unknown function DUF1675ch04+View
SL05G012210Ninja-family protein 1 (AHRD V1 *-*- NNJA1_WHEAT)%3B contains Interpro domain(s) IPR012463 Protein of unknown function DUF1675ch05+View
SL02G088910Ninja-family protein 3 (AHRD V1 ***- NNJA3_WHEAT)%3B contains Interpro domain(s) IPR012463 Protein of unknown function DUF1675ch02-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV17G04580name=GSVIVG01008104001;chr17+View
VV01G10510name=GSVIVG01012225001;chr1+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM09G25910Ninja-family protein 3 Ninja-family protein 4 Ninja-family protein 2 Ninja-family protein 1 Ninja-family protein 19+View
ZM07G26580Ninja-family protein 5 Ninja-family protein 57-View
ZM01G18240No description available.1+View


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Gene id
Species
Description
Chromosome
Strand