Anchorpoints

Gene id
AT5G65420
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G10440cyclin d4;2 (CYCD4;2); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1); Has 2823 Blast hits to 2820 proteins in 293 species: Archae - 0; Bacteria - 0; Metazoa - 1255; Fungi - 334; Plants - 962; Viruses - 9; Other Eukaryotes - 263 (source: NCBI BLink). Encodes a cyclin involved in cell proliferation during stomatal cell lineage development. cyclin d4;25-View
AT2G22490Cyclin D2;1 encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A. Cyclin D2;1 (CYCD2;1); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1).2-View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G58300No description available.Bd3+View
BD3G38417No description available.Bd3+View
BD4G32556No description available.Bd4+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00055G00360No description available.supercontig_55-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA10G25530CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD3-1,CC_gene:CYCD4-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D4-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10-View
MA06G10520CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD4-2,CC_gene:CYCD2-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Putative Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr6+View
MA07G13200CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD3-1,CC_gene:CYCD4-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D4-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr7-View
MA10G31020CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS06G11410cyclin, putative, expressed Cyclin-D3-16+View
OS09G29100cyclin, putative, expressed Cyclin-D4-19+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_09G23310No description available.Chr09+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G15780No description available.Chr05+View
PT02G10350No description available.Chr02-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB02G027020No description available.chr_2+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI002G24250No description available.scaffold_2+View
SI004G08770No description available.scaffold_4+View
SI001G34080No description available.scaffold_1-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL12G087900Cyclin d2 (AHRD V1 ***- Q6T2Z7_SOYBN)%3B contains Interpro domain(s) IPR015451 Cyclin Dch12-View
SL04G076040Cyclin d2 (AHRD V1 **** Q6T2Z7_SOYBN)%3B contains Interpro domain(s) IPR015451 Cyclin Dch04-View
SL11G010460Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA)%3B contains Interpro domain(s) IPR015451 Cyclin Dch11-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G04300name=GSVIVG01009139001;chr18-View
VV00G06850name=GSVIVG01003610001;chrUn+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G16590cyclin delta-27+View
ZM04G27270LOC5419154+View


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Gene id
Species
Description
Chromosome
Strand