Anchorpoints
- Gene id
- AT5G65420
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT5G10440 | cyclin d4;2 (CYCD4;2); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1); Has 2823 Blast hits to 2820 proteins in 293 species: Archae - 0; Bacteria - 0; Metazoa - 1255; Fungi - 334; Plants - 962; Viruses - 9; Other Eukaryotes - 263 (source: NCBI BLink). Encodes a cyclin involved in cell proliferation during stomatal cell lineage development. cyclin d4;2 | 5 | - | View |
AT2G22490 | Cyclin D2;1 encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A. Cyclin D2;1 (CYCD2;1); FUNCTIONS IN: protein binding, cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: CYCLIN D4;1 (TAIR:AT5G65420.1). | 2 | - | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD3G58300 | No description available. | Bd3 | + | View |
BD3G38417 | No description available. | Bd3 | + | View |
BD4G32556 | No description available. | Bd4 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00055G00360 | No description available. | supercontig_55 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA10G25530 | CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD3-1,CC_gene:CYCD4-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D4-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr10 | - | View |
MA06G10520 | CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD4-2,CC_gene:CYCD2-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Putative Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr6 | + | View |
MA07G13200 | CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD3-1,CC_gene:CYCD4-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D4-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr7 | - | View |
MA10G31020 | CC_gene:CYCD2-3,CC_gene:CYCD2-1,CC_gene:CYCD2-2,CC_gene:CYCD4-2,CC_gene:CYCD4-1,CC_gene:CYCD3-1,CC_functional_completeness:complete,PRODUCT:Cyclin-D3-1,GO:0005634,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr10 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS06G11410 | cyclin, putative, expressed Cyclin-D3-1 | 6 | + | View |
OS09G29100 | cyclin, putative, expressed Cyclin-D4-1 | 9 | + | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_09G23310 | No description available. | Chr09 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT05G15780 | No description available. | Chr05 | + | View |
PT02G10350 | No description available. | Chr02 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB02G027020 | No description available. | chr_2 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI002G24250 | No description available. | scaffold_2 | + | View |
SI004G08770 | No description available. | scaffold_4 | + | View |
SI001G34080 | No description available. | scaffold_1 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL12G087900 | Cyclin d2 (AHRD V1 ***- Q6T2Z7_SOYBN)%3B contains Interpro domain(s) IPR015451 Cyclin D | ch12 | - | View |
SL04G076040 | Cyclin d2 (AHRD V1 **** Q6T2Z7_SOYBN)%3B contains Interpro domain(s) IPR015451 Cyclin D | ch04 | - | View |
SL11G010460 | Cyclin D2 (AHRD V1 ***- Q8L6U0_DAUCA)%3B contains Interpro domain(s) IPR015451 Cyclin D | ch11 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV18G04300 | name=GSVIVG01009139001; | chr18 | - | View |
VV00G06850 | name=GSVIVG01003610001; | chrUn | + | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM07G16590 | cyclin delta-2 | 7 | + | View |
ZM04G27270 | LOC541915 | 4 | + | View |