Anchorpoints

Gene id
AT5G65310
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G22430homeobox protein 6 (HB6); FUNCTIONS IN: protein binding, sequence-specific DNA binding, DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to water deprivation, positive regulation of transcription, abscisic acid mediated signaling pathway, negative regulation of abscisic acid mediated signaling pathway, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox, conserved site (InterPro:IPR017970), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox protein 16 (TAIR:AT4G40060.1); Has 10935 Blast hits to 10899 proteins in 558 species: Archae - 5; Bacteria - 20; Metazoa - 8544; Fungi - 195; Plants - 1932; Viruses - 5; Other Eukaryotes - 234 (source: NCBI BLink). homeobox protein 6 Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.2-View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD3G38600No description available.Bd3+View
BD4G32737No description available.Bd4+View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00055G00670No description available.supercontig_55+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA07G13090CC_gene:ATHB-6,CC_gene:HOX13,CC_gene:ATHB-5,CC_gene:HOX20,CC_gene:ATHB-16,CC_gene:HOX4,CC_functional_completeness:modules,PRODUCT:Transcription factor (Fragment),GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr7-View
MA06G10570CC_gene:HOX13,CC_gene:HOX4,CC_gene:ATHB-16,CC_gene:HOX8,CC_gene:HOX20,CC_functional_completeness:complete,PRODUCT:Putative Homeobox-leucine zipper protein HOX20,GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr6+View
MA10G31100CC_gene:HOX13,CC_gene:ATHB-5,CC_gene:ATHB-6,CC_gene:ATHB-16,CC_gene:HOX4,CC_gene:HOX20,CC_functional_completeness:modules,PRODUCT:Transcription factor (Fragment),GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10+View
MA10G19300CC_gene:HAT7,CC_gene:ATHB-20,CC_gene:HOX23,CC_gene:ATHB-23,CC_gene:ATHB-13,CC_gene:HOX21,CC_functional_completeness:fragment,PRODUCT:Homeobox-leucine zipper protein HOX21,GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10+View
MA10G25310CC_gene:HOX13,CC_gene:HOX8,CC_gene:ATHB-16,CC_gene:HOX4,CC_gene:HOX20,CC_functional_completeness:complete,PRODUCT:Homeobox-leucine zipper protein HOX20,GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr10-View
MA00G16100CC_gene:HOX11,CC_gene:HOX27,CC_gene:HAT14,CC_gene:HAT9,CC_gene:HOX19,CC_gene:HAT22,CC_functional_completeness:complete,PRODUCT:Homeobox-leucine zipper protein HAT22,GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchrUn_random+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS09G29460Homeobox-leucine zipper protein HOX4 homeobox associated leucine zipper, putative, expressed9+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G07870No description available.Chr03+View
OSINDICA_09G23640No description available.Chr09+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G07190No description available.Chr05+View
PT07G09710No description available.Chr07-View
PT05G16150No description available.Chr05+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB02G027300No description available.chr_2+View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI002G24320No description available.scaffold_2-View
SI006G18720No description available.scaffold_6+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G074700Homeobox-leucine zipper protein (AHRD V1 *-*- Q9FXN8_ZINEL)%3B contains Interpro domain(s) IPR003106 Leucine zipper%2C homeobox-associatedch04-View
SL11G010270Homeobox-leucine zipper protein (AHRD V1 *-*- Q9FXN8_ZINEL)%3B contains Interpro domain(s) IPR001356 Homeoboxch11-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G02740name=GSVIVG01003431001;chr7-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM07G16880No description available.7+View


Download

Gene id
Species
Description
Chromosome
Strand