PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: AT5G61250
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT5G07830	Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-β-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated. It is involved in cell elongation. glucuronidase 2 glucuronidase 2 (GUS2); FUNCTIONS IN: beta-glucuronidase activity; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase family 79, N-terminal (InterPro:IPR005199); BEST Arabidopsis thaliana protein match is: glucuronidase 1 (TAIR:AT5G61250.1); Has 380 Blast hits to 370 proteins in 68 species: Archae - 0; Bacteria - 29; Metazoa - 190; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).	5	+	View

Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id	Description	Chromosome	Strand	Multiplicon
BD1G70300	No description available.	Bd1	-	View

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_07G33080	No description available.	Chr07	-	View
OSINDICA_03G09830	No description available.	Chr03	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL06G069580	Heparanase-like protein 2 (AHRD V1 **** B6U6D3_MAIZE)%3B contains Interpro domain(s) IPR005199 Glycoside hydrolase family 79%2C N-terminal	ch06	-	View
SL03G115500	Heparanase (AHRD V1 **** C9E7B7_ORYSI)%3B contains Interpro domain(s) IPR005199 Glycoside hydrolase family 79%2C N-terminal	ch03	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV01G10140	name=GSVIVG01012184001;	chr1	+	View