Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT5G61210
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G07880 | synaptosomal-associated protein SNAP25-like 29 synaptosomal-associated protein SNAP25-like 29 (SNAP29); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, cellular membrane fusion; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (TAIR:AT5G61210.1); Has 584 Blast hits to 584 proteins in 106 species: Archae - 0; Bacteria - 2; Metazoa - 452; Fungi - 6; Plants - 94; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink). member of mammalian SNAP25 Gene Family, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33. | 5 | - | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD1G22572 | No description available. | Bd1 | + | View |
| BD1G70220 | No description available. | Bd1 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA04G24000 | CC_gene:SNAP25,CC_gene:Snap25,CC_gene:SNAP29,CC_gene:SNAP30,CC_gene:SNAP33,CC_functional_completeness:fragment,PRODUCT:SNAP25 homologous protein SNAP33,GO:0016020,GO:0006886,GO:0005484,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr4 | - | View |
Oryza sativa ssp. japonica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OS02G32740 | SNARE domain containing protein, putative, expressed | 2 | + | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_02G31110 | No description available. | Chr02 | + | View |
| OSINDICA_03G09890 | No description available. | Chr03 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT12G06670 | No description available. | Chr12 | + | View |
| PT08G09380 | No description available. | Chr08 | - | View |
Setaria italica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SI001G18980 | No description available. | scaffold_1 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL03G115470 | Synaptosomal-associated protein 33 (AHRD V1 ***- D7MUI6_ARALY)%3B contains Interpro domain(s) IPR000727 Target SNARE coiled-coil region | ch03 | + | View |
| SL06G069570 | SNAP25 homologous protein SNAP33 (AHRD V1 **-- SNP33_ARATH)%3B contains Interpro domain(s) IPR000727 Target SNARE coiled-coil region | ch06 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV01G10280 | name=GSVIVG01012200001; | chr1 | - | View |