Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT5G60200
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT2G28510 | Dof-type zinc finger DNA-binding family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1531 Blast hits to 1461 proteins in 73 species: Archae - 0; Bacteria - 1; Metazoa - 1; Fungi - 8; Plants - 1087; Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink). Dof-type zinc finger DNA-binding family protein | 2 | - | View |
| AT3G45610 | Dof-type zinc finger DNA-binding family protein; CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type (InterPro:IPR003851); BEST Arabidopsis thaliana protein match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has 1099 Blast hits to 1094 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1090; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). Dof-type zinc finger DNA-binding family protein | 3 | - | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD2G24040 | No description available. | Bd2 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G20480 | No description available. | Chr10 | - | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB05G000310 | No description available. | chr_5 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL11G072500 | Dof zinc finger protein 12 (AHRD V1 *-*- A5HWG1_HORVD)%3B contains Interpro domain(s) IPR003851 Zinc finger%2C Dof-type | ch11 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV06G04800 | name=GSVIVG01025119001; | chr6 | - | View |
| VV06G03780 | name=GSVIVG01024986001; | chr6 | + | View |