Anchorpoints

Gene id
AT5G60170
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G28540RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: nucleotide binding, zinc ion binding, nucleic acid binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G45630.1); Has 940 Blast hits to 717 proteins in 219 species: Archae - 0; Bacteria - 26; Metazoa - 247; Fungi - 180; Plants - 143; Viruses - 0; Other Eukaryotes - 344 (source: NCBI BLink). RNA binding (RRM/RBD/RNP motifs) family protein2+View
AT3G45630RNA binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, zinc ion binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Zinc finger, RING-type (InterPro:IPR001841), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G60170.1); Has 2241 Blast hits to 1174 proteins in 287 species: Archae - 0; Bacteria - 612; Metazoa - 421; Fungi - 369; Plants - 161; Viruses - 3; Other Eukaryotes - 675 (source: NCBI BLink). RNA binding (RRM/RBD/RNP motifs) family protein3-View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD4G45240No description available.Bd4-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00139G00440No description available.supercontig_139-View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS12G01190RNA recognition motif containing protein, putative, expressed12+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT16G08470No description available.Chr16-View
PT06G13230No description available.Chr06+View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB05G000270No description available.chr_5+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV06G04660name=GSVIVG01025102001;chr6+View
VV08G01780name=GSVIVG01025550001;chr8+View


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Gene id
Species
Description
Chromosome
Strand