Anchorpoints
- Gene id
- AT5G59780
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT3G46130 | Encodes a putative transcription factor (MYB48) that functions to regulate flavonol biosynthesis primarily in cotyledons. myb domain protein 48 (MYB48); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, response to salicylic acid stimulus, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: myb domain protein 59 (TAIR:AT5G59780.3); Has 8993 Blast hits to 8283 proteins in 477 species: Archae - 0; Bacteria - 0; Metazoa - 750; Fungi - 483; Plants - 5952; Viruses - 3; Other Eukaryotes - 1805 (source: NCBI BLink). myb domain protein 48 | 3 | + | View |
AT2G39880 | Encodes a putative transcription factor (MYB25). myb domain protein 25 myb domain protein 25 (MYB25); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 109 (TAIR:AT3G55730.1); Has 8881 Blast hits to 7992 proteins in 491 species: Archae - 0; Bacteria - 0; Metazoa - 834; Fungi - 531; Plants - 5628; Viruses - 6; Other Eukaryotes - 1882 (source: NCBI BLink). | 2 | - | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD2G24400 | No description available. | Bd2 | + | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
CP00190G00340 | No description available. | supercontig_190 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA02G16560 | CC_gene:ODO1,CC_gene:MYB340,CC_gene:MYB305,CC_gene:MYB21,CC_gene:MYB48,CC_gene:MYB59,CC_gene:MYBAS1,CC_gene:MYBAS2,CC_functional_completeness:complete,PRODUCT:Myb-related protein MYBAS2,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr2 | - | View |
MA08G02350 | CC_gene:Myb,CC_gene:mybl1,CC_gene:MYBL2,CC_gene:MYBL1,CC_gene:Mybl1,CC_gene:Mybl2,CC_gene:MYB98,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr8 | + | View |
MA09G03830 | CC_gene:mybl1,CC_gene:Mybl2,CC_gene:MYB,CC_gene:MYBL2,CC_gene:mybl2,CC_gene:MYB44,CC_functional_completeness:fragment,PRODUCT:MYB family transcription factor%2C putative%2C expressed,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr9 | + | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT01G23550 | No description available. | Chr01 | - | View |
PT09G02730 | No description available. | Chr09 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL11G073120 | MYB transcription factor (AHRD V1 *-*- Q56UT4_ORYSJ)%3B contains Interpro domain(s) IPR015495 Myb transcription factor | ch11 | + | View |
SL06G075660 | MYB transcription factor (AHRD V1 *-** Q9C9G7_ARATH)%3B contains Interpro domain(s) IPR015495 Myb transcription factor | ch06 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV13G04070 | name=GSVIVG01016393001; | chr13 | - | View |