Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT5G59160
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G46820 | type one serine/threonine protein phosphatase 5 Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers. type one serine/threonine protein phosphatase 5 (TOPP5); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: type one serine/threonine protein phosphatase 2 (TAIR:AT5G59160.3); Has 7127 Blast hits to 6926 proteins in 615 species: Archae - 78; Bacteria - 490; Metazoa - 2413; Fungi - 1415; Plants - 987; Viruses - 13; Other Eukaryotes - 1731 (source: NCBI BLink). | 3 | - | View |
Orthologs (inter-species colinear regions)
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00081G00620 | No description available. | supercontig_81 | + | View |
| CP00019G02580 | No description available. | supercontig_19 | + | View |
Oryza sativa ssp. indica
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| OSINDICA_03G14490 | No description available. | Chr03 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT08G06080 | No description available. | Chr08 | - | View |
| PT01G24570 | No description available. | Chr01 | - | View |
| PT10G19760 | No description available. | Chr10 | + | View |
| PT09G03770 | No description available. | Chr09 | - | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL06G076430 | Serine/threonine-protein phosphatase (AHRD V1 **** Q9SPE2_MALDO)%3B contains Interpro domain(s) IPR006186 Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase | ch06 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV13G04620 | name=GSVIVG01016462001; | chr13 | - | View |
| VV06G02770 | name=GSVIVG01024867001; | chr6 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM09G27940 | No description available. | 9 | + | View |