Anchorpoints

Gene id
AT5G57360
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G18915LOV KELCH protein 2 LOV KELCH protein 2 (LKP2); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), PAS fold (InterPro:IPR013767), PAS (InterPro:IPR000014), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G57360.1); Has 9191 Blast hits to 6011 proteins in 849 species: Archae - 93; Bacteria - 2251; Metazoa - 2432; Fungi - 932; Plants - 2094; Viruses - 0; Other Eukaryotes - 1389 (source: NCBI BLink). encodes a member of F-box proteins that includes two other proteins in Arabidopsis (ZTL and FKF1). These proteins contain a unique structure containing a PAS domain at their N-terminus, an F-box motif, and 6 kelch repeats at their C-terminus. Overexpression results in arrhythmic phenotypes for a number of circadian clock outputs in both constant light and constant darkness, long hypocotyls under multiple fluences of both red and blue light, and a loss of photoperiodic control of flowering time. Although this the expression of this gene itself is not regulated by circadian clock, it physically interacts with Dof transcription factors that are transcriptionally regulated by circadian rhythm. LKP2 interacts with Di19, CO/COL family proteins.2-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00095G00480No description available.supercontig_95+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT18G09080No description available.Chr18+View
PT06G16630No description available.Chr06+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV11G09190name=GSVIVG01029229001;chr11+View


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Gene id
Species
Description
Chromosome
Strand