Anchorpoints

Gene id
AT5G53200
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G01060CAPRICE-like MYB3 (CPL3); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-related (InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT2G46410.1); Has 2727 Blast hits to 2727 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2715; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). CAPRICE-like MYB3 Encodes a Myb-related protein similar to CPC. Involved in epidermal cell differentiation. Mutants have reduced numbers of root hairs and increased trichome branching. Involved in endoreduplication. Loss of function mutants are hypertrophic and early flowering.4+View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00003G00560No description available.supercontig_3-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA08G20400CC_gene:MYB23,CC_gene:MYB82,CC_gene:GL1,CC_gene:WER,CC_gene:MYB5,CC_gene:CPC,CC_gene:TRY,CC_functional_completeness:fragment,PRODUCT:Transcription factor TRY,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS01G43180MYB family transcription factor, putative, expressed1-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT12G03120No description available.Chr12-View
PT14G09630No description available.Chr14-View
PT15G02200No description available.Chr15+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL01G095640Myb family transcription factor (AHRD V1 **** D7LC50_ARALY)%3B contains Interpro domain(s) IPR015495 Myb transcription factorch01-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G06130name=GSVIVG01027071001;chr15+View
VV16G06820name=GSVIVG01028716001;chr16-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM03G37390No description available.3+View


Download

Gene id
Species
Description
Chromosome
Strand