Anchorpoints

Gene id
AT5G47370
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G16780homeobox protein 2 homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.4+View
AT4G17460Encodes a class II HD-ZIP protein that regulates meristematic activity in different tissues, and that it is necessary for the correct formation of the gynoecium. HAT1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7491 Blast hits to 7459 proteins in 526 species: Archae - 0; Bacteria - 0; Metazoa - 5185; Fungi - 268; Plants - 1911; Viruses - 4; Other Eukaryotes - 123 (source: NCBI BLink). Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein4+View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD5G17570No description available.Bd5-View
BD3G33410No description available.Bd3+View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA06G10920CC_gene:HAT7,CC_gene:ATHB-20,CC_gene:HOX23,CC_gene:ATHB-23,CC_gene:ATHB-13,CC_gene:HOX21,CC_functional_completeness:fragment,PRODUCT:Homeobox-leucine zipper protein HOX21,GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr6-View
MA01G01700CC_gene:HOX11,CC_gene:HAT14,CC_gene:HAT4,CC_gene:ATHB-4,CC_gene:HAT1,CC_gene:HAT3,CC_gene:HAT2,CC_functional_completeness:complete,PRODUCT:Homeobox-leucine zipper protein HAT2,GO:0043565,GO:0030528,GO:0016563,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr1+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G46350homeobox associated leucine zipper, putative, expressed Homeobox-leucine zipper protein HOX174-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_10G31540Homeobox-leucine zipper protein HOX1Chr10+View
OSINDICA_04G38560Homeobox-leucine zipper protein HOX17Chr04-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT03G07980No description available.Chr03+View
PT01G15510No description available.Chr01-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB06G024480No description available.chr_6-View
SB01G029000No description available.chr_1-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI009G33110No description available.scaffold_9-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL08G078300Homeobox-leucine zipper protein (AHRD V1 ***- Q40781_PIMBR)%3B contains Interpro domain(s) IPR006712 HD-ZIP protein%2C N-terminalch08-View
SL08G007270Homeobox-leucine zipper protein (AHRD V1 ***- Q40780_PIMBR)%3B contains Interpro domain(s) IPR003106 Leucine zipper%2C homeobox-associatedch08-View
SL01G090460Homeobox-leucine zipper protein (AHRD V1 *-*- Q39862_SOYBN)%3B contains Interpro domain(s) IPR001356 Homeobox IPR017970 Homeobox%2C conserved sitech01-View
SL06G060830Homeobox-leucine zipper protein (AHRD V1 ***- Q40781_PIMBR)%3B contains Interpro domain(s) IPR006712 HD-ZIP protein%2C N-terminalch06-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV15G00910name=GSVIVG01018247001;chr15-View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM02G07850homeobox-leucine zipper protein ATHB-42+View


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