Anchorpoints
- Gene id
- AT5G47370
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G16780 | homeobox protein 2 homeobox protein 2 (HB-2); CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7230 Blast hits to 7123 proteins in 465 species: Archae - 0; Bacteria - 0; Metazoa - 4716; Fungi - 327; Plants - 2046; Viruses - 18; Other Eukaryotes - 123 (source: NCBI BLink). Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin. | 4 | + | View |
AT4G17460 | Encodes a class II HD-ZIP protein that regulates meristematic activity in different tissues, and that it is necessary for the correct formation of the gynoecium. HAT1; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, transcription, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: HD-ZIP protein, N-terminal (InterPro:IPR006712), Helix-turn-helix motif, lambda-like repressor (InterPro:IPR000047), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Leucine zipper, homeobox-associated (InterPro:IPR003106), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (TAIR:AT5G47370.1); Has 7491 Blast hits to 7459 proteins in 526 species: Archae - 0; Bacteria - 0; Metazoa - 5185; Fungi - 268; Plants - 1911; Viruses - 4; Other Eukaryotes - 123 (source: NCBI BLink). Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein | 4 | + | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD5G17570 | No description available. | Bd5 | - | View |
BD3G33410 | No description available. | Bd3 | + | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA06G10920 | CC_gene:HAT7,CC_gene:ATHB-20,CC_gene:HOX23,CC_gene:ATHB-23,CC_gene:ATHB-13,CC_gene:HOX21,CC_functional_completeness:fragment,PRODUCT:Homeobox-leucine zipper protein HOX21,GO:0043565,GO:0030528,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr6 | - | View |
MA01G01700 | CC_gene:HOX11,CC_gene:HAT14,CC_gene:HAT4,CC_gene:ATHB-4,CC_gene:HAT1,CC_gene:HAT3,CC_gene:HAT2,CC_functional_completeness:complete,PRODUCT:Homeobox-leucine zipper protein HAT2,GO:0043565,GO:0030528,GO:0016563,GO:0005634,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr1 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS04G46350 | homeobox associated leucine zipper, putative, expressed Homeobox-leucine zipper protein HOX17 | 4 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_10G31540 | Homeobox-leucine zipper protein HOX1 | Chr10 | + | View |
OSINDICA_04G38560 | Homeobox-leucine zipper protein HOX17 | Chr04 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT03G07980 | No description available. | Chr03 | + | View |
PT01G15510 | No description available. | Chr01 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB06G024480 | No description available. | chr_6 | - | View |
SB01G029000 | No description available. | chr_1 | - | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI009G33110 | No description available. | scaffold_9 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL08G078300 | Homeobox-leucine zipper protein (AHRD V1 ***- Q40781_PIMBR)%3B contains Interpro domain(s) IPR006712 HD-ZIP protein%2C N-terminal | ch08 | - | View |
SL08G007270 | Homeobox-leucine zipper protein (AHRD V1 ***- Q40780_PIMBR)%3B contains Interpro domain(s) IPR003106 Leucine zipper%2C homeobox-associated | ch08 | - | View |
SL01G090460 | Homeobox-leucine zipper protein (AHRD V1 *-*- Q39862_SOYBN)%3B contains Interpro domain(s) IPR001356 Homeobox IPR017970 Homeobox%2C conserved site | ch01 | - | View |
SL06G060830 | Homeobox-leucine zipper protein (AHRD V1 ***- Q40781_PIMBR)%3B contains Interpro domain(s) IPR006712 HD-ZIP protein%2C N-terminal | ch06 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV15G00910 | name=GSVIVG01018247001; | chr15 | - | View |
Zea mays
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
ZM02G07850 | homeobox-leucine zipper protein ATHB-4 | 2 | + | View |