Anchorpoints
- Gene id
- AT5G47220
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G17490 | ethylene responsive element binding factor 6 Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. It is involved in the response to reactive oxygen species and light stress. ethylene responsive element binding factor 6 (ERF6); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: ethylene responsive element binding factor 5 (TAIR:AT5G47230.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | 4 | - | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD5G17480 | No description available. | Bd5 | - | View |
BD3G50490 | No description available. | Bd3 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA06G10700 | CC_gene:ERF062,CC_gene:ERF053,CC_gene:ERF055,CC_gene:ERF057,CC_gene:ERF056,CC_gene:ERF060,CC_gene:ERF058,CC_gene:RAP2-4,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr6 | - | View |
MA02G10680 | CC_gene:ERF2,CC_gene:ERF106,CC_gene:ERF6,CC_gene:ERF104,CC_gene:ERF105,CC_gene:ERF5,CC_functional_completeness:missing_functional_completeness,PRODUCT:Hypothetical protein,GO:0003700,GO:0003677,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr2 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS02G43790 | ethylene-responsive transcription factor, putative, expressed | 2 | - | View |
OS04G46220 | ethylene-responsive transcription factor, putative, expressed | 4 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_04G38430 | No description available. | Chr04 | - | View |
OSINDICA_02G42220 | No description available. | Chr02 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT01G15410 | No description available. | Chr01 | - | View |
Sorghum bicolor
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SB06G024355 | No description available. | chr_6 | - | View |
SB01G028930 | No description available. | chr_1 | + | View |
Setaria italica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SI001G26800 | No description available. | scaffold_1 | - | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL01G090300 | Ethylene responsive transcription factor 1b (AHRD V1 *-*- C0J9I8_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch01 | + | View |
SL08G007230 | Ethylene responsive transcription factor 1a (AHRD V1 *-** C0J9I9_9ROSA)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch08 | - | View |
SL08G078170 | Ethylene-responsive transcription factor 1A (AHRD V1 **** A9P6A4_MEDTR)%3B contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF%2C DNA-binding | ch08 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
VV15G01110 | name=GSVIVG01018272001; | chr15 | + | View |