PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: AT5G37540
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT1G66180	The gene encodes a putative aspartyl protease (ASP). Its expression is induced in response to light and ascorbate. Eukaryotic aspartyl protease family protein Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT5G37540.1); Has 1897 Blast hits to 1884 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 164; Plants - 1696; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).	1	+	View

Orthologs (inter-species colinear regions)

Oryza sativa ssp. indica

Gene id	Description	Chromosome	Strand	Multiplicon
OSINDICA_02G48030	No description available.	Chr02	-	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT04G08500	No description available.	Chr04	+	View

Sorghum bicolor

Gene id	Description	Chromosome	Strand	Multiplicon
SB04G028990	No description available.	chr_4	+	View

Setaria italica

Gene id	Description	Chromosome	Strand	Multiplicon
SI001G31950	No description available.	scaffold_1	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL05G051240	Aspartic proteinase nepenthesin I (AHRD V1 ***- A9ZMF9_NEPAL)%3B contains Interpro domain(s) IPR001461 Peptidase A1	ch05	+	View
SL11G011440	Aspartic proteinase nepenthesin-1 (AHRD V1 **-- B6TS94_MAIZE)%3B contains Interpro domain(s) IPR001461 Peptidase A1	ch11	-	View