Anchorpoints

Gene id
AT5G10380
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT4G40070RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G05200.1); Has 9770 Blast hits to 9744 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2524; Fungi - 782; Plants - 4953; Viruses - 74; Other Eukaryotes - 1437 (source: NCBI BLink).4+View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G32560No description available.Bd2-View
BD3G58350No description available.Bd3-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA03G06770CC_gene:ATL37,CC_gene:ATL9,CC_gene:ATL36,CC_gene:ATL11,CC_gene:ATL15,CC_gene:ATL32,CC_gene:ATL31,CC_gene:ATL6,CC_functional_completeness:modules,PRODUCT:Putative E3 ubiquitin-protein ligase ATL6,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr3+View
MA09G15390CC_gene:ATL34,CC_gene:ATL11,CC_gene:ATL15,CC_gene:ATL9,CC_gene:ATL32,CC_gene:ATL36,CC_gene:ATL31,CC_gene:ATL6,CC_functional_completeness:modules,PRODUCT:Putative zinc finger%2C C3HC4 type domain containing protein%2C expressed,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr9+View
MA03G04980CC_gene:ATL43,CC_gene:ATL52,CC_gene:ATL50,CC_gene:ATL48,CC_gene:ATL47,CC_gene:ATL46,CC_gene:ATL13,CC_gene:ATL49,CC_functional_completeness:fragment,PRODUCT:Putative RING-H2 finger protein ATL49,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr3+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS06G11450zinc finger, C3HC4 type domain containing protein, expressed6-View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_03G25990No description available.Chr03+View
OSINDICA_06G10910No description available.Chr06-View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G09750No description available.Chr07+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL04G014220RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech04+View
SL11G010330RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-typech11+View


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Gene id
Species
Description
Chromosome
Strand