Anchorpoints
- Gene id
- AT5G10380
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT4G40070 | RING/U-box superfamily protein RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G05200.1); Has 9770 Blast hits to 9744 proteins in 297 species: Archae - 0; Bacteria - 0; Metazoa - 2524; Fungi - 782; Plants - 4953; Viruses - 74; Other Eukaryotes - 1437 (source: NCBI BLink). | 4 | + | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
BD2G32560 | No description available. | Bd2 | - | View |
BD3G58350 | No description available. | Bd3 | - | View |
Musa acuminata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MA03G06770 | CC_gene:ATL37,CC_gene:ATL9,CC_gene:ATL36,CC_gene:ATL11,CC_gene:ATL15,CC_gene:ATL32,CC_gene:ATL31,CC_gene:ATL6,CC_functional_completeness:modules,PRODUCT:Putative E3 ubiquitin-protein ligase ATL6,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | + | View |
MA09G15390 | CC_gene:ATL34,CC_gene:ATL11,CC_gene:ATL15,CC_gene:ATL9,CC_gene:ATL32,CC_gene:ATL36,CC_gene:ATL31,CC_gene:ATL6,CC_functional_completeness:modules,PRODUCT:Putative zinc finger%2C C3HC4 type domain containing protein%2C expressed,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr9 | + | View |
MA03G04980 | CC_gene:ATL43,CC_gene:ATL52,CC_gene:ATL50,CC_gene:ATL48,CC_gene:ATL47,CC_gene:ATL46,CC_gene:ATL13,CC_gene:ATL49,CC_functional_completeness:fragment,PRODUCT:Putative RING-H2 finger protein ATL49,GO:0008270,GO:0005515,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr3 | + | View |
Oryza sativa ssp. japonica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OS06G11450 | zinc finger, C3HC4 type domain containing protein, expressed | 6 | - | View |
Oryza sativa ssp. indica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
OSINDICA_03G25990 | No description available. | Chr03 | + | View |
OSINDICA_06G10910 | No description available. | Chr06 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
PT07G09750 | No description available. | Chr07 | + | View |
Solanum lycopersicum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
SL04G014220 | RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch04 | + | View |
SL11G010330 | RING finger protein (AHRD V1 *-*- C6EUD3_SOYBN)%3B contains Interpro domain(s) IPR018957 Zinc finger%2C C3HC4 RING-type | ch11 | + | View |