Anchorpoints

Gene id
AT5G06700
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT3G12060Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TRICHOME BIREFRINGENCE-LIKE 1 (TBL1); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF231, plant (InterPro:IPR004253); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF828) (TAIR:AT5G06700.1); Has 1352 Blast hits to 1335 proteins in 32 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 1346; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). Plant protein of unknown function (DUF828)3+View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00085G00580No description available.supercontig_85-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA08G23390CC_gene:VC_1711,CC_gene:EXL4,CC_gene:dpp5,CC_gene:srp54,CC_gene:deoB,CC_gene:casd1,CC_gene:C7orf58,CC_functional_completeness:fragment,PRODUCT:leaf senescence related protein%2C putative%2C expressed,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr8+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT16G05930No description available.Chr16-View
PT06G19390No description available.Chr06-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G080550No description available.ch10-View
SL10G078910No description available.ch10-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G09060name=GSVIVG01033480001;chr8-View


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Gene id
Species
Description
Chromosome
Strand