Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT5G05600
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT3G11180 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1). 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | 3 | + | View |
| AT3G55970 | jasmonate-regulated gene 21 (JRG21); FUNCTIONS IN: oxidoreductase activity, iron ion binding; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Isopenicillin N synthase (InterPro:IPR002283), Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT5G05600.1); Has 8809 Blast hits to 8750 proteins in 1005 species: Archae - 0; Bacteria - 1115; Metazoa - 109; Fungi - 1073; Plants - 4993; Viruses - 0; Other Eukaryotes - 1519 (source: NCBI BLink). jasmonate-regulated gene 21 | 3 | - | View |
Orthologs (inter-species colinear regions)
Brachypodium distachyon
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| BD2G54090 | No description available. | Bd2 | + | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA09G04550 | CC_gene:ACO1,CC_gene:ACO,CC_gene:FLS,CC_gene:ACO4,CC_gene:SRG1,CC_gene:ACO2,CC_functional_completeness:complete,PRODUCT:Putative 1-aminocyclopropane-1-carboxylate oxidase 2,GO:0016491,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.14.11.9 | chr9 | + | View |
| MA11G24520 | CC_gene:FHT,CC_gene:ANS,CC_gene:FLS1,CC_gene:At1g06620,CC_gene:SRG1,CC_gene:FLS,CC_functional_completeness:complete,PRODUCT:Putative Flavonol synthase/flavanone 3-hydroxylase,GO:0016491,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:1.14.11.9 | chr11 | + | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT10G18800 | No description available. | Chr10 | + | View |
| PT08G06930 | No description available. | Chr08 | - | View |
Sorghum bicolor
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SB01G038520 | No description available. | chr_1 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL10G076660 | Anthocyanidin synthase (AHRD V1 **-- Q2QCX4_GOSHI)%3B contains Interpro domain(s) IPR005123 Oxoglutarate and iron-dependent oxygenase | ch10 | + | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV13G10370 | name=GSVIVG01032809001; | chr13 | - | View |
Zea mays
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| ZM08G32430 | No description available. | 8 | - | View |
| ZM03G27860 | No description available. | 3 | - | View |
| ZM01G12260 | No description available. | 1 | - | View |