Anchorpoints

Gene id
AT5G01070
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G37950RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G05830.1); Has 598 Blast hits to 594 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 45; Fungi - 4; Plants - 538; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). RING/FYVE/PHD zinc finger superfamily protein2-View
AT5G59000RING/FYVE/PHD zinc finger superfamily protein RING/FYVE/PHD zinc finger superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C3HC4 RING-type (InterPro:IPR018957), Zinc finger, RING-CH-type (InterPro:IPR011016); BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT5G05830.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).5+View


Orthologs (inter-species colinear regions)

Brachypodium distachyon

Gene id Description Chromosome Strand Multiplicon
BD2G23610No description available.Bd2-View
BD2G55030No description available.Bd2-View

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00019G02360No description available.supercontig_19+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS05G37900zinc finger, C3HC4 type domain containing protein, expressed5+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT06G09400No description available.Chr06-View
PT01G24670No description available.Chr01-View
PT09G03970No description available.Chr09-View
PT10G19510No description available.Chr10+View
PT08G06260No description available.Chr08-View

Sorghum bicolor

Gene id Description Chromosome Strand Multiplicon
SB09G022180No description available.chr_9+View
SB03G039940No description available.chr_3-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI003G22550No description available.scaffold_3-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL06G076610Zinc finger family protein (Fragment) (AHRD V1 *--- D7M766_ARALY)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-typech06-View
SL09G011770Zinc finger family protein (Fragment) (AHRD V1 *-*- D7M766_ARALY)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-typech09-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV08G13590name=GSVIVG01034042001;chr8-View
VV06G02500name=GSVIVG01024828001;chr6-View


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Gene id
Species
Description
Chromosome
Strand