Anchorpoints

Gene id
AT4G38510
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G20260One of three genes encoding the vacuolar ATP synthase subunit B1. The protein binds to and co-localizes with F-actin, bundles F-actin to form higher-order structure, and stabilizes actin filaments in vitro. ATPase, V1 complex, subunit B protein ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, ATP binding, proton-transporting ATPase activity, rotational mechanism; INVOLVED IN: proton transport, ATP metabolic process, ATP synthesis coupled proton transport; LOCATED IN: plasma membrane, chloroplast, vacuole; EXPRESSED IN: cotyledon, male gametophyte, guard cell, cultured cell; EXPRESSED DURING: seedling growth, seed development stages; CONTAINS InterPro DOMAIN/s: ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G76030.1); Has 40448 Blast hits to 39328 proteins in 9688 species: Archae - 965; Bacteria - 20989; Metazoa - 1674; Fungi - 795; Plants - 8187; Viruses - 0; Other Eukaryotes - 7838 (source: NCBI BLink).1+View
AT1G76030ATPase, V1 complex, subunit B protein; FUNCTIONS IN: hydrogen ion transporting ATP synthase activity, rotational mechanism, hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances, proton-transporting ATPase activity, rotational mechanism, ATP binding; INVOLVED IN: response to cadmium ion, glucose mediated signaling pathway; LOCATED IN: plasma membrane, chloroplast, vacuole, membrane; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seedling growth; CONTAINS InterPro DOMAIN/s: ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal (InterPro:IPR000793), ATPase, alpha/beta subunit, nucleotide-binding domain, active site (InterPro:IPR020003), ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal (InterPro:IPR004100), ATPase, alpha/beta subunit, nucleotide-binding domain (InterPro:IPR000194), ATPase, V1 complex, subunit B (InterPro:IPR005723); BEST Arabidopsis thaliana protein match is: ATPase, V1 complex, subunit B protein (TAIR:AT1G20260.1); Has 40608 Blast hits to 39489 proteins in 9699 species: Archae - 963; Bacteria - 21151; Metazoa - 1673; Fungi - 795; Plants - 8192; Viruses - 0; Other Eukaryotes - 7834 (source: NCBI BLink). ATPase, V1 complex, subunit B protein One of three genes encoding the vacuolar ATP synthase subunit B1. This subunit was shown to interact with the gene product of hexokinase1 (ATHXK1). This interaction, however, is solely restricted to the nucleus. The protein binds to and co-localizes with F-actin, bundles F-actin to form higher-order structure, and stabilizes actin filaments in vitro.1+View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00020G01120No description available.supercontig_20+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT04G17750No description available.Chr04+View
PT09G13780No description available.Chr09+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G055670V-type ATP synthase beta chain (AHRD V1 ***- VATB_PYRHO)%3B contains Interpro domain(s) IPR005723 ATPase%2C V1 complex%2C subunit Bch10+View
SL01G111760V-type ATP synthase beta chain (AHRD V1 ***- VATB_PYRHO)%3B contains Interpro domain(s) IPR005723 ATPase%2C V1 complex%2C subunit Bch01+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G04360name=GSVIVG01023982001;chr3+View


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