Anchorpoints

Gene id
AT4G36240
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT5G66320Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. GATA transcription factor 5 (GATA5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Transcription factor, GATA, plant (InterPro:IPR016679), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 6 (TAIR:AT3G51080.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). GATA transcription factor 55-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00006G02010No description available.supercontig_6+View

Oryza sativa ssp. japonica

Gene id Description Chromosome Strand Multiplicon
OS04G45650expressed protein4+View

Oryza sativa ssp. indica

Gene id Description Chromosome Strand Multiplicon
OSINDICA_04G37800No description available.Chr04+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT05G11760No description available.Chr05-View
PT04G16150No description available.Chr04+View
PT07G01660No description available.Chr07-View

Setaria italica

Gene id Description Chromosome Strand Multiplicon
SI007G19060No description available.scaffold_7+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL02G062380GATA transcription factor 9 (AHRD V1 *-*- B6STZ1_MAIZE)%3B contains Interpro domain(s) IPR000679 Zinc finger%2C GATA-typech02-View
SL03G033660GATA transcription factor 9 (AHRD V1 *-*- B6STZ1_MAIZE)%3B contains Interpro domain(s) IPR016679 Transcription factor%2C GATA%2C plantch03-View
SL02G084590GATA transcription factor 9 (AHRD V1 *-*- B6STZ1_MAIZE)%3B contains Interpro domain(s) IPR016679 Transcription factor%2C GATA%2C plantch02-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV03G06060name=GSVIVG01024194001;chr3+View
VV04G01170name=GSVIVG01018833001;chr4+View

Zea mays

Gene id Description Chromosome Strand Multiplicon
ZM02G08300GATA zinc finger family protein2-View


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Gene id
Species
Description
Chromosome
Strand