Anchorpoints

Gene id
AT4G35230
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G17090SHORT SUSPENSOR (SSP); FUNCTIONS IN: binding, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: suspensor development, positive regulation of intracellular protein kinase cascade, N-terminal protein myristoylation, zygote elongation; LOCATED IN: internal side of plasma membrane; EXPRESSED IN: zygote, sperm cell, male gametophyte, micropylar endosperm, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: BR-signaling kinase 1 (TAIR:AT4G35230.1); Has 24310 Blast hits to 24046 proteins in 638 species: Archae - 2; Bacteria - 524; Metazoa - 2907; Fungi - 33; Plants - 20343; Viruses - 55; Other Eukaryotes - 446 (source: NCBI BLink). Encodes a N-myrystolylated plasma membrane associated member of the RLCK II family of IRAK/Pelle-like kinases that regulates the MAPK pathway that promotes the elongation of the Arabidopsis zygote and the development of its basal daughter cell into the extra-embryonic suspensor. SSP transcripts are produced in mature pollen but are not translated until delivery to the zygote and the endosperm after fertilization, exerting a paternal effect on embryonic development. The primary role of its kinase domain may lie in protein binding rather than in catalysis as key residues of the active site are absent. Protein kinase protein with tetratricopeptide repeat domain2-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00020G01800No description available.supercontig_20-View
CP00026G02150No description available.supercontig_26+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT02G01180No description available.Chr02+View
PT04G18280No description available.Chr04-View
PT09G14280No description available.Chr09-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV18G00690name=GSVIVG01008685001;chr18+View
VV03G03910name=GSVIVG01023930001;chr3+View


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Gene id
Species
Description
Chromosome
Strand