PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: AT4G34740
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT4G38880	GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2 GLN phosphoribosyl pyrophosphate amidotransferase 3 (ASE3); FUNCTIONS IN: amidophosphoribosyltransferase activity; INVOLVED IN: purine base biosynthetic process, nucleoside metabolic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Phosphoribosyltransferase (InterPro:IPR000836), Amidophosphoribosyl transferase (InterPro:IPR005854), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 2 (TAIR:AT4G34740.1); Has 21476 Blast hits to 21464 proteins in 2887 species: Archae - 620; Bacteria - 12443; Metazoa - 408; Fungi - 374; Plants - 226; Viruses - 18; Other Eukaryotes - 7387 (source: NCBI BLink). GLN phosphoribosyl pyrophosphate amidotransferase 3	4	+	View
AT2G16570	GLN phosphoribosyl pyrophosphate amidotransferase 1 (ASE1); FUNCTIONS IN: amidophosphoribosyltransferase activity; INVOLVED IN: purine base biosynthetic process, metabolic process; LOCATED IN: cell wall; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Phosphoribosyltransferase (InterPro:IPR000836), Amidophosphoribosyl transferase (InterPro:IPR005854), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 2 (TAIR:AT4G34740.1); Has 21477 Blast hits to 21465 proteins in 2911 species: Archae - 627; Bacteria - 12302; Metazoa - 410; Fungi - 379; Plants - 300; Viruses - 17; Other Eukaryotes - 7442 (source: NCBI BLink). GLN phosphoribosyl pyrophosphate amidotransferase 1 Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesis	2	-	View

Orthologs (inter-species colinear regions)

Carica papaya

Gene id	Description	Chromosome	Strand	Multiplicon
CP00150G00040	No description available.	supercontig_150	+	View

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT09G12560	No description available.	Chr09	-	View
PT04G16400	No description available.	Chr04	-	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL01G110520	Glucosamine--fructose-6-phosphate aminotransferase (AHRD V1 -- GLMS_METKA)%3B contains Interpro domain(s) IPR005854 Amidophosphoribosyl transferase	ch01	-	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV03G05750	name=GSVIVG01024157001;	chr3	-	View