Anchorpoints

Gene id
AT4G28470
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G20580encoding the RPN subunits of the 26S proteasome 26S proteasome regulatory subunit S2 1A 26S proteasome regulatory subunit S2 1A (RPN1A); FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: regulation of cell cycle, protein catabolic process, ubiquitin-dependent protein catabolic process; LOCATED IN: proteasome regulatory particle, base subcomplex, proteasome complex, nucleus, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn1 subunit (InterPro:IPR016643), Armadillo-type fold (InterPro:IPR016024), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory subunit S2 1B (TAIR:AT4G28470.1); Has 1002 Blast hits to 968 proteins in 295 species: Archae - 0; Bacteria - 4; Metazoa - 376; Fungi - 294; Plants - 141; Viruses - 0; Other Eukaryotes - 187 (source: NCBI BLink).2+View


Orthologs (inter-species colinear regions)

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT07G13720No description available.Chr07+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL10G00817026S proteasome regulatory subunit (AHRD V1 ***- C6HL17_AJECH)ch10+View
SL07G05365026S proteasome regulatory subunit (AHRD V1 ***- A8J3A4_CHLRE)%3B contains Interpro domain(s) IPR016643 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn1 subunitch07+View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G02010name=GSVIVG01020602001;chr12+View


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Gene id
Species
Description
Chromosome
Strand