Anchorpoints

Gene id
AT4G28370
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT2G20650RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G28370.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). RING/U-box superfamily protein Encodes a putative RING E3 ubiquitin ligase based on its 84.5% amino acid identity with FLY1, which possesses this activity in vitro. It is predicted to be localized to the endomembrane system based on protein topology.2-View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00083G00630No description available.supercontig_83+View

Populus trichocarpa

Gene id Description Chromosome Strand Multiplicon
PT17G01260No description available.Chr17+View
PT07G13930No description available.Chr07-View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL07G053850Zinc finger (C3HC4 RING finger) protein (AHRD V1 *--- B9PQV1_TOXGO)%3B contains Interpro domain(s) IPR011016 Zinc finger%2C RING-CH-typech07-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV12G01750name=GSVIVG01020571001;chr12-View


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Gene id
Species
Description
Chromosome
Strand