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WorkbenchAnchorpoints
- Gene id
- AT4G26650
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G55550 | RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT4G26650.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). RNA-binding (RRM/RBD/RNP motifs) family protein | 5 | - | View |
Orthologs (inter-species colinear regions)
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00012G02030 | No description available. | supercontig_12 | + | View |
| CP00012G01340 | No description available. | supercontig_12 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA01G20020 | CC_gene:Rbp6,CC_gene:Hrb27C,CC_gene:MSI2,CC_gene:Msi2,CC_gene:SPBC660.15,CC_gene:Msi1,CC_gene:MSI1,CC_functional_completeness:complete,PRODUCT:Putative RNA-binding protein Musashi homolog 1,GO:0003676,GO:0000166,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr1 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT11G08810 | No description available. | Chr11 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL10G006050 | Heterogeneous nuclear ribonucleoprotein A3 (AHRD V1 *--- B6TGB9_MAIZE)%3B contains Interpro domain(s) IPR000504 RNA recognition motif%2C RNP-1 | ch10 | + | View |
| SL12G014600 | Heterogeneous nuclear ribonucleoprotein A3 (AHRD V1 *--- B6TGB9_MAIZE)%3B contains Interpro domain(s) IPR000504 RNA recognition motif%2C RNP-1 | ch12 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV19G11470 | name=GSVIVG01037771001; | chr19 | - | View |
| VV19G06000 | name=GSVIVG01014729001; | chr19 | - | View |