Expansion plot
Gene family finder
Ks-graphs
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Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
WorkbenchAnchorpoints
- Gene id
- AT4G18820
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| AT5G45720 | AAA-type ATPase family protein AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, DNA binding, DNA-directed DNA polymerase activity, nucleotide binding, ATP binding; INVOLVED IN: DNA replication; LOCATED IN: DNA polymerase III complex; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal (InterPro:IPR008921), DNA polymerase III, subunit gamma/ tau (InterPro:IPR012763); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT4G18820.1); Has 13188 Blast hits to 13168 proteins in 2852 species: Archae - 365; Bacteria - 7695; Metazoa - 381; Fungi - 497; Plants - 312; Viruses - 26; Other Eukaryotes - 3912 (source: NCBI BLink). | 5 | - | View |
Orthologs (inter-species colinear regions)
Carica papaya
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| CP00007G01130 | No description available. | supercontig_7 | - | View |
Musa acuminata
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| MA09G05770 | CC_gene:dnaX,CC_functional_completeness:complete,PRODUCT:ATP binding protein%2C putative%2C expressed,GO:0017111,GO:0009360,GO:0006260,GO:0005524,GO:0003887,GO:0003677,GO:0000166,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number | chr9 | - | View |
Populus trichocarpa
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| PT11G07130 | No description available. | Chr11 | + | View |
| PT04G06170 | No description available. | Chr04 | + | View |
Solanum lycopersicum
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| SL02G072090 | DNA polymerase III subunit gamma/tau (AHRD V1 *-*- D3EN68_UCYNA)%3B contains Interpro domain(s) IPR012763 DNA polymerase III%2C subunit gamma/ tau | ch02 | - | View |
Vitis vinifera
| Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|
| VV10G02550 | name=GSVIVG01021264001; | chr10 | + | View |