PLAZA 3.0 Monocots : colinear gene pairs

Anchorpoints

Gene id: AT4G18380
Organism: Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id	Description	Chromosome	Strand	Multiplicon
AT5G46170	F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G18380.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). F-box family protein	5	-	View
AT1G30200	F-box family protein F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT5G46170.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).	1	+	View

Orthologs (inter-species colinear regions)

Populus trichocarpa

Gene id	Description	Chromosome	Strand	Multiplicon
PT04G06590	No description available.	Chr04	-	View
PT11G08290	No description available.	Chr11	+	View

Solanum lycopersicum

Gene id	Description	Chromosome	Strand	Multiplicon
SL08G048430	F-box family protein (AHRD V1 ***- D7MS00_ARALY)%3B contains Interpro domain(s) IPR001810 Cyclin-like F-box	ch08	-	View
SL02G070480	F-box family protein (AHRD V1 ***- B9H2A8_POPTR)%3B contains Interpro domain(s) IPR001810 Cyclin-like F-box	ch02	+	View

Vitis vinifera

Gene id	Description	Chromosome	Strand	Multiplicon
VV10G04580	name=GSVIVG01021526001;	chr10	+	View