Anchorpoints

Gene id
AT4G02570
Organism
Arabidopsis thaliana

Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
AT1G02980cullin 2 (CUL2); FUNCTIONS IN: ubiquitin protein ligase binding; INVOLVED IN: cell cycle, ubiquitin-dependent protein catabolic process; LOCATED IN: SCF ubiquitin ligase complex, chloroplast envelope; EXPRESSED IN: sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Cullin homology (InterPro:IPR016158), Cullin protein, neddylation domain (InterPro:IPR019559), Cullin, N-terminal (InterPro:IPR001373), Cullin repeat-like-containing domain (InterPro:IPR016159); BEST Arabidopsis thaliana protein match is: Cullin family protein (TAIR:AT1G43140.1); Has 2240 Blast hits to 2201 proteins in 240 species: Archae - 0; Bacteria - 18; Metazoa - 947; Fungi - 508; Plants - 372; Viruses - 0; Other Eukaryotes - 395 (source: NCBI BLink). encodes an Arabidopsis cullin cullin 21+View


Orthologs (inter-species colinear regions)

Carica papaya

Gene id Description Chromosome Strand Multiplicon
CP00009G01820No description available.supercontig_9-View

Musa acuminata

Gene id Description Chromosome Strand Multiplicon
MA01G27770CC_gene:CUL4A,CC_gene:cul3a,CC_gene:Cul3,CC_gene:culC,CC_gene:At1g43140,CC_gene:CUL2,CC_gene:CUL1,CC_functional_completeness:complete,PRODUCT:Cullin-1,GO:0031625,GO:0031461,GO:0006511,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_numberchr1+View

Solanum lycopersicum

Gene id Description Chromosome Strand Multiplicon
SL09G074680Cullin 1B (AHRD V1 ***- Q711G7_TOBAC)%3B contains Interpro domain(s) IPR001373 Cullin%2C N-terminalch09-View

Vitis vinifera

Gene id Description Chromosome Strand Multiplicon
VV07G03630name=GSVIVG01010966001;chr7+View


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Gene id
Species
Description
Chromosome
Strand